Biological Physics

Authors and titles for recent submissions

• Fri, 22 Nov 2024
• Thu, 21 Nov 2024
• Wed, 20 Nov 2024
• Tue, 19 Nov 2024
• Mon, 18 Nov 2024

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Fri, 22 Nov 2024 (showing 3 of 3 entries )

[1] arXiv:2411.14196 [pdf, html, other]

Title: Uncertainty Quantification in Working Memory via Moment Neural Networks

Hengyuan Ma, Wenlian Lu, Jianfeng Feng

Comments: Code released: this https URL

Subjects: Biological Physics (physics.bio-ph); Neural and Evolutionary Computing (cs.NE); Applications (stat.AP)

[2] arXiv:2411.13680 (cross-list from q-bio.QM) [pdf, html, other]

Title: Long-term predictive models for mosquito borne diseases: a narrative review

Marcio Maciel Bastos, Luiz Max Carvalho, Eduardo Correa Araujo, Flávio Codeço Coelho

Subjects: Quantitative Methods (q-bio.QM); Dynamical Systems (math.DS); Biological Physics (physics.bio-ph)

[3] arXiv:2411.13630 (cross-list from q-bio.MN) [pdf, html, other]

Title: Competitive binding of Activator-Repressor in Stochastic Gene Expression

Amit Kumar Das

Comments: 34 pages,47 figures

Subjects: Molecular Networks (q-bio.MN); Biological Physics (physics.bio-ph)

Thu, 21 Nov 2024 (showing 4 of 4 entries )

[4] arXiv:2411.13530 [pdf, other]

Title: Towards Linking Histological Changes to Liver Viscoelasticity: A Hybrid Analytical-Computational Micromechanics Approach

Haritya Shah, Murthy Guddati

Comments: 15 pages, 7 figures

Subjects: Biological Physics (physics.bio-ph)

[5] arXiv:2411.13092 [pdf, other]

Title: On Macroscopic Intricate States

François Dubois (LMSSC)

Journal-ref: Kybernetes, 2017, 47 (2), pp.321-332

Subjects: Biological Physics (physics.bio-ph)

[6] arXiv:2411.13445 (cross-list from cond-mat.soft) [pdf, html, other]

Title: Elucidating chirality transfer in liquid crystals of viruses

Eric Grelet, Maxime Tortora

Journal-ref: Nature Materials, Volume 23, September 2024, 1276-1282

Subjects: Soft Condensed Matter (cond-mat.soft); Biological Physics (physics.bio-ph)

[7] arXiv:2411.13406 (cross-list from physics.flu-dyn) [pdf, html, other]

Title: Modeling the effect of hydrodynamic wakes in dynamical models of large-scale fish schools

Ji Zhou, Jung-Hee Seo, Rajat Mittal

Comments: 28 pages, 19 figures. This paper is considering submission to Physics of Fluids

Subjects: Fluid Dynamics (physics.flu-dyn); Biological Physics (physics.bio-ph)

Wed, 20 Nov 2024 (showing 6 of 6 entries )

[8] arXiv:2411.12618 [pdf, other]

Title: Light-Matter Interactions in Photosynthetic Protein Attached to solids and Nanostructures

Itai Carmeli, Chanoch Carmeli

Comments: 22 pages, 5 figures

Subjects: Biological Physics (physics.bio-ph); Chemical Physics (physics.chem-ph)

[9] arXiv:2411.12362 [pdf, html, other]

Title: Quantum memory circuit for ion channel dynamics in the nervous system

Yu-Juan Sun, Wei-Min Zhang

Comments: 17 pages, 7 figures

Subjects: Biological Physics (physics.bio-ph); Mesoscale and Nanoscale Physics (cond-mat.mes-hall); Quantum Physics (quant-ph)

[10] arXiv:2411.12167 [pdf, html, other]

Title: Exceptional Points and Stability in Nonlinear Models of Population Dynamics having $\mathcal{PT}$ symmetry

Alexander Felski, Flore K. Kunst

Comments: 14 pages, 9 figures

Subjects: Biological Physics (physics.bio-ph); Mathematical Physics (math-ph); Quantum Physics (quant-ph)

[11] arXiv:2411.12515 (cross-list from cond-mat.soft) [pdf, other]

Title: Transitions Between Cooperative and Crowding-Dominated Collective Motion in non-Jammed MDCK Monolayers

Steven J. Chisolm, Emily Guo, Vignesh Subramaniam, Kyle D. Schulze, Thomas E. Angelini

Comments: 5 figures; supplementary information

Subjects: Soft Condensed Matter (cond-mat.soft); Biological Physics (physics.bio-ph)

[12] arXiv:2411.11991 (cross-list from cond-mat.stat-mech) [pdf, html, other]

Title: Spectral Coarse-Graining and Rescaling for Preserving Structural and Dynamical Properties in Graphs

M. Schmidt, F. Caccioli, T. Aste

Comments: 7 pages, 5 figures

Subjects: Statistical Mechanics (cond-mat.stat-mech); Disordered Systems and Neural Networks (cond-mat.dis-nn); Biological Physics (physics.bio-ph); Data Analysis, Statistics and Probability (physics.data-an)

[13] arXiv:2402.17086 (cross-list from q-bio.QM) [pdf, html, other]

Title: Multicellular simulations with shape and volume constraints using optimal transport

Antoine Diez, Jean Feydy

Subjects: Quantitative Methods (q-bio.QM); Dynamical Systems (math.DS); Numerical Analysis (math.NA); Biological Physics (physics.bio-ph)

Tue, 19 Nov 2024 (showing 5 of 5 entries )

[14] arXiv:2411.11572 [pdf, other]

Title: Twin Peak Method for Estimating Tissue Viscoelasticity using Shear Wave Elastography

Shuvrodeb Adikary, Matthew W. Urban, Murthy N. Guddati

Comments: 18 pages, 11 figures

Subjects: Biological Physics (physics.bio-ph)

[15] arXiv:2411.10672 [pdf, other]

Title: Non-classical scaling of strength with size in marine biological fibers

Sayaka Kochiyama, Haneesh Kesari

Subjects: Biological Physics (physics.bio-ph)

[16] arXiv:2411.11712 (cross-list from physics.optics) [pdf, other]

Title: Consensus Statement on Brillouin Light Scattering Microscopy of Biological Materials

Pierre Bouvet, Carlo Bevilacqua, Yogeshwari Ambekar, Giuseppe Antonacci, Joshua Au, Silvia Caponi, Sophie Chagnon-Lessard, Juergen Czarske, Thomas Dehoux, Daniele Fioretto, Yujian Fu, Jochen Guck, Thorsten Hamann, Dag Heinemann, Torsten Jähnke, Hubert Jean-Ruel, Irina Kabakova, Kristie Koski, Nektarios Koukourakis, David Krause, Salvatore La Cavera III, Timm Landes, Jinhao Li, Jeremie Margueritat, Maurizio Mattarelli, Michael Monaghan, Darryl R. Overby, Fernando Perez-Cota, Emanuele Pontecorvo, Robert Prevedel, Giancarlo Ruocco, John Sandercock, Giuliano Scarcelli, Filippo Scarponi, Claudia Testi, Peter Török, Lucie Vovard, Wolfgang Weninger, Vladislav Yakovlev, Seok-Hyun Yun, Jitao Zhang, Francesca Palombo, Alberto Bilenca, Kareem Elsayad

Comments: Main Text & Supplementary Text: 56 pages, 3 Figures, 2 Supplementary Figures, 1 Supplementary Table

Subjects: Optics (physics.optics); Biological Physics (physics.bio-ph); Instrumentation and Detectors (physics.ins-det)

[17] arXiv:2411.11143 (cross-list from q-bio.NC) [pdf, html, other]

Title: Integrated Ising Model with global inhibition for decision making

Olga Tapinova, Tal Finkelman, Tamar Reitich-Stolero, Rony Paz, Assaf Tal, Nir S. Gov

Comments: Main text: 14 pages; SI: 40 pages

Subjects: Neurons and Cognition (q-bio.NC); Biological Physics (physics.bio-ph)

[18] arXiv:2411.10607 (cross-list from cond-mat.soft) [pdf, html, other]

Title: Depletion interaction between cylindrical inclusions in polymer brushes

Ji Woong Yu, Daeseong Yong, Bae-Yeun Ha, Changbong Hyeon

Comments: 6 pages, 4 figures

Subjects: Soft Condensed Matter (cond-mat.soft); Statistical Mechanics (cond-mat.stat-mech); Biological Physics (physics.bio-ph)

Mon, 18 Nov 2024

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